Yes, clean the discs with rubbing alcohol or a degreaser. Remove the pads and, assuming they don't need to be replaced from wear, apply Dawn to the braking surface of one and rub the braking surfaces of the pads together to clean off any gunk. If the pads are really glazed over, gently sand the surface with a fine grit sandpaper (scrub the glaze off), rinse and pat dry. Make sure you bed the pads properly.
Bedding process - from cyclingtips.com
"Every disc brake and pad manufacturer has its own bed-in procedure, but all are slight variations on a similar set of steps. The key is to heat and cool the brakes in a repeatable and consistent manner, without accidentally scoring the pads or rotor by braking too hard, too soon. Again, the goal is a consistent transfer layer. Here’s what we have found works:
- Hop on your bike somewhere with plenty of room. Pedal up to a moderate speed – 15km/h (9mph) or so.
- Sit down in the saddle and apply the brakes evenly, without skidding, until speed drops to a walking pace.
- Release the brakes while you’re still moving.
- Repeat 10 times. You will feel brake power increasing with each repetition. Be careful not to skid as brake power increases with each repeat.
- Perform the same set of steps, but increase speed to 25km/h (15mph).
- Repeat 5-6 times.
"SRAM says to perform 20 slowdowns from a medium speed, and then another 10 from a higher speed. Shimano has a slightly different take, suggesting 10 stops with each brake..."
Please click on the link and read the entire article for more information and deeper explanation of the process. Proper bedding reduces squeeks, increases braking performance and modulation. It is a process that should be done on any new bike or when you change pads.
Strangely, sometimes it's sonic resonance from the frame. I have brand new e-bike that squawks (vibrating chatter) from the rear brake. Tried everything. Replaced the pads, then the discs, then the brakes and finally the entire back wheel. Nothing changes. I put the squeaky brakes on another bike and they are perfectly quiet. A Google search let me know it is more common than I thought possible. Probably not your issue, but an interesting phenomenon.
http://forums.mtbr.com/specialized/...ance-has-anyone-got-long-term-fix-779649.html